Incorrect nomination information (REQUESTER ID) in submitted SampleSheet
Example cause: Error in SampleSheet/FinalReport
Correction:
If submitted Nominator and Lab are the same: request to CDCB customer service via Redmine ticket, with the corrected SampleSheet attached including only the individuals that require the Requester ID change.
If submitted Nominator and Lab are NOT the same: same as above, but written authorization of the change by the assigned Requester sent to CDCB customer service.
Genotype assigned to wrong animal ID
Example cause: DNA sample miss identified at dairy
2) if a lab, resubmit the correct SampleSheet/FinalReport for the animals involved to CDCB automated system
3) Create a Format 1 record with record type U and the sample ID of the genotype to be reassigned in columns 54-70. Can only be used by the nominator of the genotype to be reassigned.
Bad quality genotype
Example cause: Sample/Lab/genotyping problem
Correction: Regenotype animal and submit the new FinalReport and SampleSheet
NOTE: If there is no change in iDs, then genotype(s) with acceptable quality will be used (e.g. no need to withdraw bad quality genotypes as they are designated not usable)
Withdrawal of genotype
Example cause: Submission of genotype not intended for CDCB (e.g. non-dairy cattle, different species, etc)
Correction: If the genotype is not usable, it can be withdrawn by clicking the withdraw button in the use_ind column of the Genotype Query(30 SNP). Otherwise, send a withdrawal request to the CDCB customer service via Redmine ticket, including a SampleSheet with the individuals to withdraw. Requires clear explanation of why this action is necessary