INDEX
- Table of contents
- CDCB public documentation
- CDCB approved nominators documentation
- CDCB certified genotyping laboratories documentation
- National Evaluation Centers
CDCB public documentation¶
- International genotype exchange partners
- CDCB Guidelines for Health Data Management
- CDCB Mark & Logo Guidelines
- QCS quality control error documentation
- Evaluation files access
CDCB approved nominators documentation¶
GENOMIC NOMINATOR APPLICATION AND CERTIFICATION INFORMATION¶
- CDCB Genomic Nominators - Quality Certification Guidelines (pdf)
- CDCB Genomic Nominators - Application Form (docx)
- CDCB Genomic Nominators - SOP template (docx)
- CDCB Genomic Nominators & Laboratories - MLA (docx)
- QC Metrics for Genomic Nominators
- Approved CDCB Genomic Nominators
- Genomic Nominator Certification Procedure
- Genomic Nominators Annual Review Schedule
USEFUL DOCUMENTATION¶
- CDCB Genomic Nominator - Navigation guide (pdf)
- CDCB Fee Schedule for Genomic Evaluation Fees (pdf)
- 2017 CDCB Genomic Nominators Workshop
- 2018 CDCB Genomic Nominators and Laboratories Workshop
- 2019 CDCB Genomic Nominators and Laboratories Workshop
- 2021 CDCB Genomic Nominators and Laboratories Workshop
- 2022 CDCB Genomic Nominators and Laboratories Workshop
- 2023 National Cooperator Dairy Database Workshop
- 2024 CDCB Genomic Nominators and Laboratories Workshop
- CDCB Web Queries
- CDCB Genomic Dictionary
- CDCB general files distributed to nominators
- CDCB email notifications sent to individuals included in the Nominator's contact list
- CDCB Accepted International IDs
- CDCB Accepted Embryo IDs
- CDCB Accepted goat ID numbers
- American ID registration
- Birth Date Rules
- Exchange of genotypes with Lactanet
- Reasons that a genomic evaluation was not released
- Reasons that a Sire was not Discovered
- Reasons that the fee code would be reassigned to N by CDCB
- DOB limitation for foreign bulls
- Genotype Withdrawal
- New Queries Introduction Session
- Request for CDCB accounts
- Error code documentation
- References
NOMINATOR SERVICES¶
COMMONLY USED CODES¶
- Genomic error codes
- Genomic fee code
- Genomic usability code
- Genotype recipient code
- Herd code difference reason code (HRC)
- Multiple birth code
- Parentage indicator code
- Pedigree and phenotypic error codes
- Record type code
- Source code
PROCEDURES¶
- Adding MGS and MGGS
- Corrections to nominations
- Corrections to pedigree (Format 1 / Format 4)
- Corrections to pedigree to resolve genomic conflicts
- Corrections to production (Format 4 - DRPC ONLY)
- Create a format1G
- Dealing with clone records
- Embryo and live animal merging process
- Nominate as parentage verification only
- Request for Large Transfer of Genotypes (Selling Genotypes)
- Sex and Fee code conflict
- Sharing genomic results with other active nominators
- Updating the Recipient Code of Nominations
FORMATS¶
- Pedigree, production, & reproduction data
- Format 1 (Pedigree data)
- Format 1E (Pedigree data - Error records)
- Format 4 (Lactation data)
- Format 4E (Lactation data - Error records)
- Format 5 (Reproductive data)
- Format 5E (Reproductive data - Error records)
- Format 6 (Health data)
- Format 6E (Health data - Error records)
- CES (Calving Ease Scores)
- PVR (Parentage Verification Record)
- Genetic evaluations
- Format 38 (Bull/Buck genetic evaluation data - production)
- Format 40 (Bull genetic evaluation data - type traits)
- Format 41 (Cow genetic evaluation data - type traits)
- Format 105 (Cow/Doe genetic evaluation data - production)
- Format 940 (Buck genetic evaluation - type traits)
- Format 941 (Doe genetic evaluation - type traits)
- CT (Bull genetic evaluation data - Calving ease)
- Miscellaneous
- Format 2 (Ownership data)
- Format 7 (Type traits appraisal data)
- Format 14 (Herd test day and yearly average data)
- Format 395 (NAAB AI codes - AI cross-reference)
- REC (Recessive Codes)
- Genomic files
- Genomic evaluations format (CSV)
- Monthly and weekly genomic evaluations CSV (discontinued in September 2019)
- Monthly and weekly genomic evaluations XML (discontinued in September 2019)
CDCB certified genotyping laboratories documentation¶
GENOTYPING LABS APPLICATION AND CERTIFICATION INFORMATION¶
- CDCB Genotyping Laboratories - Quality Certification Guidelines (pdf)
- CDCB Genotyping Laboratories - Application Form (docx)
- CDCB Genotyping Laboratories - SOP template (docx)
- CDCB Genotyping Laboratories - MLA (docx)
- CDCB Confidentiality Agreement - Data Validation (docx)
- CDCB Genotyping Laboratories - SNP array validation and SNP information (pdf)
- QC Metrics for Genotyping Laboratories
- Approved CDCB Genotyping Laboratories
- Genotyping Laboratory Certification Procedure
- Genomic Laboratories Annual Review Schedule
USEFUL DOCUMENTATION¶
- CDCB Genomic Dictionary
- CDCB Web Queries
- Problem. Files Generated during Processing
- Files Generated During Check Process
- Chips Used in CDCB Evaluation
- CDCB SNP array validation form
- CDCB SNP array validation fees
- New Chip Requirements
COMMONLY USED CODES¶
PROCEDURES¶
- Corrections to genotypes (SampleSheet and FinalReports)
FORMATS¶
National Evaluation Centers¶
NATIONAL EVALUATION CENTERS - RECOGNITION INFORMATION¶
- National Evaluation Center - MLA (docx)
- National Evaluation Center - Data Exchange Approval Form (docx)
- National Evaluation Centers that are authorized to send data to CDCB upon request by nominators
- CDCB file submission protocol for National Evaluation Centers
FORMATS¶