Genomic breed base representation format (CSV)¶

• Table of contents
• Genomic breed base representation format (CSV)
  • Introduction
  • Public files content information
  • BBReval files
    • Format description

Introduction¶

Genomic breed base representation (BBR) evaluations will be distributed in a single file on a monthly basis. These files are private to our collaborators.
Character encoding of these files is UTF-8.

Public files content information¶

These files are strictly private and are provided on a monthly basis along with "infoANIM" and "infoEVAL" files.
The naming of the file is: [BB]_[NOMINATOR]_[YYMM]_BBRdata.csv (where [BB]=Breed code, [NOMINATOR] is the nominator receiving the values and [YYMM] is date format)

BBReval files¶

• Example file format (NOTE: Extra spaces provided for clarity. The file provided does not contain any blank spaces.
  

  animid,sex,name,birth,AYpct,BSpct,GUpct,HOpct,JEpct
  HOUSA000000000001,F,NAME1,20200101,0,0,0,100,0
  HOUSA000000000001,F,,20200102,0,0,0,90,10
  HOUSA000000000001,F,NAME2,20200103,0,0,0,100,0
  HOUSA000000000001,F,,20200104,0,0,0,100,0
  [...]
  

Format description¶

• Separator is comma ","
• All animals have the same # of rows and columns.
• Missing values are empty fields (no blanks)
• ROW #1 is the header: "animid,sex,name,birth,AYpct,BSpct,GUpct,HOpct,JEpct" |=.*Field name*|=.*Description*|=.*Data Type*|*Extra information*| |animid|ID 17 of the animal|Character|| |sex|Sex of the animal (M or F)|Character|| |name|Name of the animal|Character|Max 30bytes| |birth|Date of birth in format YYYYMMDD|Interger|| |AYpct|Estimated BBR % for AY breed|Integer|| |BSpct|Estimated BBR % for BS breed|Integer|| |GUpct|Estimated BBR % for GU breed|Integer|| |HOpct|Estimated BBR % for HO breed|Integer|| |JEpct|Estimated BBR % for JE breed|Integer||
• ROW #2 onwards is the animal specific information.